Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim3O70209 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim3O70209 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim3O70209 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim3O70209 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim3O70209 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim3O70209 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Pdlim3O70209 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.33□□□□□ -0.11
Pdlim3O70209 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim3O70209 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim3O70209 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.33□□□□□ -0.11
Pdlim3O70209 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.33□□□□□ -0.11
Pdlim3O70209 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pdlim3O70209 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Gm26039-201ENSMUST00000158152 144 ntBASIC14.33□□□□□ -0.12
Pdlim3O70209 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Gm5417-201ENSMUST00000079706 384 ntBASIC14.33□□□□□ -0.12
Pdlim3O70209 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim3O70209 BC037039-201ENSMUST00000192003 2205 ntBASIC14.33□□□□□ -0.12
Pdlim3O70209 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.33□□□□□ -0.12
Pdlim3O70209 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdlim3O70209 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.32□□□□□ -0.12
Pdlim3O70209 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim3O70209 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdlim3O70209 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.32□□□□□ -0.12
Pdlim3O70209 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdlim3O70209 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim3O70209 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim3O70209 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdlim3O70209 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Pdlim3O70209 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Pdlim3O70209 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.31□□□□□ -0.12
Pdlim3O70209 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pdlim3O70209 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.31□□□□□ -0.12
Pdlim3O70209 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdlim3O70209 Gm30025-201ENSMUST00000218555 728 ntBASIC14.31□□□□□ -0.12
Pdlim3O70209 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim3O70209 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms