Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.75□□□□□ -0.53
Rpl35aO55142 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.75□□□□□ -0.53
Rpl35aO55142 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Birc2-201ENSMUST00000054878 378 ntBASIC11.75□□□□□ -0.53
Rpl35aO55142 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rpl35aO55142 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.75□□□□□ -0.53
Rpl35aO55142 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Rpl35aO55142 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.75□□□□□ -0.53
Rpl35aO55142 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.74□□□□□ -0.53
Rpl35aO55142 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.74□□□□□ -0.53
Rpl35aO55142 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Gm27459-201ENSMUST00000184860 107 ntBASIC11.74□□□□□ -0.53
Rpl35aO55142 Gm28659-201ENSMUST00000188013 759 ntBASIC11.74□□□□□ -0.53
Rpl35aO55142 Gm5864-201ENSMUST00000202263 970 ntBASIC11.74□□□□□ -0.53
Rpl35aO55142 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rpl35aO55142 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rpl35aO55142 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl35aO55142 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rpl35aO55142 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rpl35aO55142 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpl35aO55142 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpl35aO55142 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.73□□□□□ -0.53
Rpl35aO55142 Gm7506-201ENSMUST00000207758 815 ntBASIC11.73□□□□□ -0.53
Rpl35aO55142 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.73□□□□□ -0.53
Rpl35aO55142 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.73□□□□□ -0.53
Rpl35aO55142 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpl35aO55142 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.73□□□□□ -0.53
Rpl35aO55142 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rpl35aO55142 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl35aO55142 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpl35aO55142 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms