Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.09□□□□□ -0.31
SncaO55042 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.09□□□□□ -0.31
SncaO55042 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.09□□□□□ -0.31
SncaO55042 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.09□□□□□ -0.31
SncaO55042 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.09□□□□□ -0.31
SncaO55042 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SncaO55042 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SncaO55042 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
SncaO55042 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
SncaO55042 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
SncaO55042 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SncaO55042 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.08□□□□□ -0.32
SncaO55042 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.08□□□□□ -0.32
SncaO55042 Gm27389-201ENSMUST00000183622 195 ntBASIC13.08□□□□□ -0.32
SncaO55042 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.08□□□□□ -0.32
SncaO55042 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.08□□□□□ -0.32
SncaO55042 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SncaO55042 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SncaO55042 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SncaO55042 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
SncaO55042 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SncaO55042 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.08□□□□□ -0.32
SncaO55042 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SncaO55042 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SncaO55042 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.07□□□□□ -0.32
SncaO55042 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SncaO55042 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.07□□□□□ -0.32
SncaO55042 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.07□□□□□ -0.32
SncaO55042 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.07□□□□□ -0.32
SncaO55042 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SncaO55042 Gm18959-201ENSMUST00000208954 655 ntBASIC13.07□□□□□ -0.32
SncaO55042 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.07□□□□□ -0.32
SncaO55042 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SncaO55042 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.06□□□□□ -0.32
SncaO55042 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms