Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Prom1O54990 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Prom1O54990 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.35■□□□□ 0.37
Prom1O54990 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Prom1O54990 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Haglr-201ENSMUST00000100000 2085 ntBASIC17.34■□□□□ 0.37
Prom1O54990 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.34■□□□□ 0.37
Prom1O54990 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Gm5177-201ENSMUST00000183092 997 ntBASIC17.34■□□□□ 0.37
Prom1O54990 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Prom1O54990 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.34■□□□□ 0.37
Prom1O54990 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Prom1O54990 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prom1O54990 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Prom1O54990 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Prom1O54990 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prom1O54990 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prom1O54990 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prom1O54990 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prom1O54990 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prom1O54990 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prom1O54990 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Prom1O54990 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.33■□□□□ 0.37
Prom1O54990 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prom1O54990 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prom1O54990 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Prom1O54990 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Prom1O54990 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.33■□□□□ 0.36
Prom1O54990 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.33■□□□□ 0.36
Prom1O54990 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Prom1O54990 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Prom1O54990 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Prom1O54990 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prom1O54990 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prom1O54990 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.32■□□□□ 0.36
Prom1O54990 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.32■□□□□ 0.36
Prom1O54990 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prom1O54990 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.31■□□□□ 0.36
Prom1O54990 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.31■□□□□ 0.36
Prom1O54990 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.31■□□□□ 0.36
Prom1O54990 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.31■□□□□ 0.36
Prom1O54990 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.31■□□□□ 0.36
Prom1O54990 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.31■□□□□ 0.36
Prom1O54990 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prom1O54990 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms