Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Per2O54943 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Per2O54943 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Per2O54943 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Per2O54943 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Per2O54943 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.45■□□□□ 0.22
Per2O54943 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Per2O54943 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.45■□□□□ 0.22
Per2O54943 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.45■□□□□ 0.22
Per2O54943 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Per2O54943 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Per2O54943 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.45■□□□□ 0.22
Per2O54943 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Per2O54943 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Per2O54943 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per2O54943 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Per2O54943 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.44■□□□□ 0.22
Per2O54943 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Per2O54943 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Per2O54943 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.44■□□□□ 0.22
Per2O54943 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Per2O54943 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Per2O54943 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Per2O54943 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Per2O54943 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Per2O54943 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Per2O54943 Olfr129-201ENSMUST00000122318 993 ntBASIC16.43■□□□□ 0.22
Per2O54943 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Per2O54943 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Per2O54943 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Per2O54943 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.43■□□□□ 0.22
Per2O54943 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms