Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Gm15467-201ENSMUST00000120582 445 ntBASIC17.12■□□□□ 0.33
Clk2O35491 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clk2O35491 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clk2O35491 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.12■□□□□ 0.33
Clk2O35491 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.12■□□□□ 0.33
Clk2O35491 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clk2O35491 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clk2O35491 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clk2O35491 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clk2O35491 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clk2O35491 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Clk2O35491 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.11■□□□□ 0.33
Clk2O35491 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.11■□□□□ 0.33
Clk2O35491 Gm4899-201ENSMUST00000178708 719 ntBASIC17.11■□□□□ 0.33
Clk2O35491 Gm5264-201ENSMUST00000190584 848 ntBASIC17.11■□□□□ 0.33
Clk2O35491 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.11■□□□□ 0.33
Clk2O35491 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.11■□□□□ 0.33
Clk2O35491 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.11■□□□□ 0.33
Clk2O35491 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.11■□□□□ 0.33
Clk2O35491 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.11■□□□□ 0.33
Clk2O35491 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.11■□□□□ 0.33
Clk2O35491 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clk2O35491 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk2O35491 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.1■□□□□ 0.33
Clk2O35491 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clk2O35491 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Clk2O35491 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Gm18489-201ENSMUST00000172565 551 ntBASIC17.1■□□□□ 0.33
Clk2O35491 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.1■□□□□ 0.33
Clk2O35491 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.1■□□□□ 0.33
Clk2O35491 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.1■□□□□ 0.33
Clk2O35491 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clk2O35491 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clk2O35491 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clk2O35491 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.1■□□□□ 0.33
Clk2O35491 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk2O35491 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clk2O35491 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Grk6-207ENSMUST00000225925 2769 ntBASIC17.09■□□□□ 0.33
Clk2O35491 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Gm12260-201ENSMUST00000122447 411 ntBASIC17.09■□□□□ 0.33
Clk2O35491 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms