Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clcn6O35454 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn6O35454 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Clcn6O35454 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn6O35454 Gm16285-201ENSMUST00000162999 347 ntBASIC17.03■□□□□ 0.32
Clcn6O35454 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.03■□□□□ 0.32
Clcn6O35454 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Clcn6O35454 Gm44038-201ENSMUST00000203952 889 ntBASIC17.03■□□□□ 0.32
Clcn6O35454 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn6O35454 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Clcn6O35454 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcn6O35454 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcn6O35454 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Clcn6O35454 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Gm19210-201ENSMUST00000199562 1350 ntBASIC17.02■□□□□ 0.32
Clcn6O35454 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Clcn6O35454 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Clcn6O35454 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcn6O35454 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Gm13836-201ENSMUST00000121159 501 ntBASIC17.02■□□□□ 0.32
Clcn6O35454 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.02■□□□□ 0.32
Clcn6O35454 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.02■□□□□ 0.32
Clcn6O35454 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Clcn6O35454 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Gm10925-201ENSMUST00000189941 678 ntBASIC17.02■□□□□ 0.32
Clcn6O35454 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Gm21814-202ENSMUST00000203277 873 ntBASIC17.02■□□□□ 0.32
Clcn6O35454 Gm9731-201ENSMUST00000209480 747 ntBASIC17.02■□□□□ 0.32
Clcn6O35454 Odf3b-204ENSMUST00000227834 930 ntBASIC17.02■□□□□ 0.32
Clcn6O35454 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Clcn6O35454 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcn6O35454 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcn6O35454 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Clcn6O35454 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcn6O35454 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.01■□□□□ 0.31
Clcn6O35454 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.01■□□□□ 0.31
Clcn6O35454 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Gm37858-201ENSMUST00000192759 1231 ntBASIC17.01■□□□□ 0.31
Clcn6O35454 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.01■□□□□ 0.31
Clcn6O35454 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.01■□□□□ 0.31
Clcn6O35454 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
Clcn6O35454 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn6O35454 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clcn6O35454 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clcn6O35454 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn6O35454 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn6O35454 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17■□□□□ 0.31
Clcn6O35454 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms