Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.36□□□□□ -0.43
Tnfsf11O35235 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Gm5643-201ENSMUST00000117081 966 ntBASIC12.35□□□□□ -0.43
Tnfsf11O35235 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.35□□□□□ -0.43
Tnfsf11O35235 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf11O35235 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.34□□□□□ -0.43
Tnfsf11O35235 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Phf7-203ENSMUST00000226565 1971 ntBASIC12.34□□□□□ -0.43
Tnfsf11O35235 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf11O35235 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tnfsf11O35235 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Tnfsf11O35235 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tnfsf11O35235 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tnfsf11O35235 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.33□□□□□ -0.44
Tnfsf11O35235 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.33□□□□□ -0.44
Tnfsf11O35235 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Gm13186-201ENSMUST00000118031 316 ntBASIC12.33□□□□□ -0.44
Tnfsf11O35235 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Gm7791-201ENSMUST00000219066 539 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms