Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cl1O35188 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Cx3cl1O35188 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cx3cl1O35188 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cx3cl1O35188 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Gm25406-201ENSMUST00000157599 105 ntBASIC14.83□□□□□ -0.04
Cx3cl1O35188 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.83□□□□□ -0.04
Cx3cl1O35188 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.83□□□□□ -0.04
Cx3cl1O35188 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cl1O35188 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Gm27459-201ENSMUST00000184860 107 ntBASIC14.82□□□□□ -0.04
Cx3cl1O35188 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Cx3cl1O35188 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cl1O35188 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Gm43347-201ENSMUST00000200226 580 ntBASIC14.81□□□□□ -0.04
Cx3cl1O35188 Gm9172-201ENSMUST00000212092 954 ntBASIC14.81□□□□□ -0.04
Cx3cl1O35188 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.81□□□□□ -0.04
Cx3cl1O35188 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cl1O35188 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.8□□□□□ -0.04
Cx3cl1O35188 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms