Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Gfra3O35118 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.63□□□□□ -0.23
Gfra3O35118 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Mir5131-201ENSMUST00000175426 93 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Gfra3O35118 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm8825-201ENSMUST00000182565 998 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm4518-201ENSMUST00000182638 718 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.63□□□□□ -0.23
Gfra3O35118 Gm10060-201ENSMUST00000212002 111 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.63□□□□□ -0.23
Gfra3O35118 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.63□□□□□ -0.23
Gfra3O35118 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gfra3O35118 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gfra3O35118 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Gm11780-201ENSMUST00000136880 516 ntBASIC13.62□□□□□ -0.23
Gfra3O35118 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Gfra3O35118 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Gm2651-201ENSMUST00000203560 838 ntBASIC13.62□□□□□ -0.23
Gfra3O35118 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.62□□□□□ -0.23
Gfra3O35118 Gm18622-201ENSMUST00000219361 595 ntBASIC13.62□□□□□ -0.23
Gfra3O35118 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gfra3O35118 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gfra3O35118 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra3O35118 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gfra3O35118 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.61□□□□□ -0.23
Gfra3O35118 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Gfra3O35118 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gfra3O35118 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.61□□□□□ -0.23
Gfra3O35118 Gm15173-201ENSMUST00000122049 433 ntBASIC13.61□□□□□ -0.23
Gfra3O35118 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.61□□□□□ -0.23
Gfra3O35118 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Gfra3O35118 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.61□□□□□ -0.23
Gfra3O35118 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.61□□□□□ -0.23
Gfra3O35118 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gfra3O35118 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.61□□□□□ -0.23
Gfra3O35118 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms