Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Gm22697-201ENSMUST00000175194 63 ntBASIC18.78■□□□□ 0.6
Hdac1O09106 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.78■□□□□ 0.6
Hdac1O09106 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.78■□□□□ 0.6
Hdac1O09106 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.78■□□□□ 0.6
Hdac1O09106 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Hdac1O09106 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.77■□□□□ 0.6
Hdac1O09106 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.77■□□□□ 0.6
Hdac1O09106 Gm9987-201ENSMUST00000069768 567 ntBASIC18.77■□□□□ 0.6
Hdac1O09106 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hdac1O09106 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hdac1O09106 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hdac1O09106 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Hdac1O09106 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Mir770-201ENSMUST00000103252 94 ntBASIC18.76■□□□□ 0.59
Hdac1O09106 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hdac1O09106 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.76■□□□□ 0.59
Hdac1O09106 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac1O09106 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.76■□□□□ 0.59
Hdac1O09106 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hdac1O09106 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.75■□□□□ 0.59
Hdac1O09106 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.75■□□□□ 0.59
Hdac1O09106 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.75■□□□□ 0.59
Hdac1O09106 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hdac1O09106 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.75■□□□□ 0.59
Hdac1O09106 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.75■□□□□ 0.59
Hdac1O09106 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.75■□□□□ 0.59
Hdac1O09106 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.75■□□□□ 0.59
Hdac1O09106 Gm18032-201ENSMUST00000222541 538 ntBASIC18.75■□□□□ 0.59
Hdac1O09106 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hdac1O09106 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hdac1O09106 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.75■□□□□ 0.59
Hdac1O09106 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.75■□□□□ 0.59
Hdac1O09106 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac1O09106 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Hdac1O09106 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hdac1O09106 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Hdac1O09106 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms