Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.16■□□□□ 0.18
Ercc2O08811 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc2O08811 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Ercc2O08811 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ercc2O08811 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.15■□□□□ 0.18
Ercc2O08811 Gm4459-201ENSMUST00000118750 468 ntBASIC16.15■□□□□ 0.18
Ercc2O08811 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ercc2O08811 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.15■□□□□ 0.18
Ercc2O08811 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.15■□□□□ 0.18
Ercc2O08811 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Ercc2O08811 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.15■□□□□ 0.18
Ercc2O08811 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ercc2O08811 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ercc2O08811 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc2O08811 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.15■□□□□ 0.18
Ercc2O08811 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ercc2O08811 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Ercc2O08811 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Ercc2O08811 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ercc2O08811 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Ercc2O08811 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ercc2O08811 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ercc2O08811 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.14■□□□□ 0.17
Ercc2O08811 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.14■□□□□ 0.17
Ercc2O08811 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.14■□□□□ 0.17
Ercc2O08811 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.14■□□□□ 0.17
Ercc2O08811 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ercc2O08811 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ercc2O08811 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc2O08811 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.13■□□□□ 0.17
Ercc2O08811 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ercc2O08811 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ercc2O08811 Gm12497-201ENSMUST00000138778 237 ntBASIC16.13■□□□□ 0.17
Ercc2O08811 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ercc2O08811 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.13■□□□□ 0.17
Ercc2O08811 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ercc2O08811 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ercc2O08811 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc2O08811 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.13■□□□□ 0.17
Ercc2O08811 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ercc2O08811 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ercc2O08811 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ercc2O08811 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ercc2O08811 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.12■□□□□ 0.17
Ercc2O08811 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.12■□□□□ 0.17
Ercc2O08811 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms