Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34bJ3QNR8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Gm25911-201ENSMUST00000157621 56 ntBASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34bJ3QNR8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim34bJ3QNR8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms