Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NpcdF8VQB8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Gm15358-201ENSMUST00000119249 520 ntBASIC18.93■□□□□ 0.62
NpcdF8VQB8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Gm18489-201ENSMUST00000172565 551 ntBASIC18.93■□□□□ 0.62
NpcdF8VQB8 Gm5177-201ENSMUST00000183092 997 ntBASIC18.93■□□□□ 0.62
NpcdF8VQB8 Gm27622-201ENSMUST00000183779 60 ntBASIC18.93■□□□□ 0.62
NpcdF8VQB8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.93■□□□□ 0.62
NpcdF8VQB8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.93■□□□□ 0.62
NpcdF8VQB8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NpcdF8VQB8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm9682-201ENSMUST00000197505 556 ntBASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.92■□□□□ 0.62
NpcdF8VQB8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.92■□□□□ 0.62
NpcdF8VQB8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NpcdF8VQB8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Gm5866-201ENSMUST00000177881 973 ntBASIC18.91■□□□□ 0.62
NpcdF8VQB8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.91■□□□□ 0.62
NpcdF8VQB8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.91■□□□□ 0.62
NpcdF8VQB8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.91■□□□□ 0.62
NpcdF8VQB8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.91■□□□□ 0.62
NpcdF8VQB8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NpcdF8VQB8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Gm43125-201ENSMUST00000201724 730 ntBASIC18.9■□□□□ 0.62
NpcdF8VQB8 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.9■□□□□ 0.62
NpcdF8VQB8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NpcdF8VQB8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NpcdF8VQB8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
NpcdF8VQB8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
NpcdF8VQB8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.89■□□□□ 0.61
NpcdF8VQB8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.89■□□□□ 0.61
NpcdF8VQB8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms