Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.89□□□□□ -0.03
Colca2F8VPY8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.89□□□□□ -0.03
Colca2F8VPY8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.88□□□□□ -0.03
Colca2F8VPY8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Gm18737-201ENSMUST00000173594 937 ntBASIC14.88□□□□□ -0.03
Colca2F8VPY8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Mir8102-201ENSMUST00000184148 139 ntBASIC14.88□□□□□ -0.03
Colca2F8VPY8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Colca2F8VPY8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.87□□□□□ -0.03
Colca2F8VPY8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.87□□□□□ -0.03
Colca2F8VPY8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Colca2F8VPY8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Gm6415-201ENSMUST00000118488 348 ntBASIC14.86□□□□□ -0.03
Colca2F8VPY8 Gm2810-201ENSMUST00000118681 990 ntBASIC14.86□□□□□ -0.03
Colca2F8VPY8 Gm14722-201ENSMUST00000118943 689 ntBASIC14.86□□□□□ -0.03
Colca2F8VPY8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Mir7684-201ENSMUST00000183858 60 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms