Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Ccdc141E9Q8Q6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Gm13337-201ENSMUST00000119183 1594 ntBASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Gm13453-201ENSMUST00000118708 357 ntBASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Mir8102-201ENSMUST00000184148 139 ntBASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Ccdc141E9Q8Q6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Ccdc141E9Q8Q6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Ccdc141E9Q8Q6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Gm45774-201ENSMUST00000211992 2665 ntBASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC23.51■■□□□ 1.35
Ccdc141E9Q8Q6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Gm13015-201ENSMUST00000118674 204 ntBASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Gm17837-201ENSMUST00000186435 985 ntBASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Gm6598-201ENSMUST00000202719 2615 ntBASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ccdc141E9Q8Q6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Gm43767-201ENSMUST00000198933 381 ntBASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Gm7901-201ENSMUST00000120430 1597 ntBASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.49■■□□□ 1.35
Ccdc141E9Q8Q6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Gm28630-201ENSMUST00000187806 498 ntBASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Ccdc141E9Q8Q6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc141E9Q8Q6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc141E9Q8Q6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc141E9Q8Q6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc141E9Q8Q6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc141E9Q8Q6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc141E9Q8Q6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms