Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube4aE9Q735 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube4aE9Q735 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube4aE9Q735 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube4aE9Q735 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube4aE9Q735 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.89■□□□□ 0.61
Ube4aE9Q735 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ube4aE9Q735 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Gm5177-201ENSMUST00000183092 997 ntBASIC18.89■□□□□ 0.61
Ube4aE9Q735 Gm45747-201ENSMUST00000212203 999 ntBASIC18.89■□□□□ 0.61
Ube4aE9Q735 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.89■□□□□ 0.61
Ube4aE9Q735 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4aE9Q735 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ube4aE9Q735 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.88■□□□□ 0.61
Ube4aE9Q735 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Gm14722-201ENSMUST00000118943 689 ntBASIC18.88■□□□□ 0.61
Ube4aE9Q735 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.88■□□□□ 0.61
Ube4aE9Q735 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4aE9Q735 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Gm18246-201ENSMUST00000221023 728 ntBASIC18.87■□□□□ 0.61
Ube4aE9Q735 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4aE9Q735 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.86■□□□□ 0.61
Ube4aE9Q735 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.86■□□□□ 0.61
Ube4aE9Q735 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Gm27301-201ENSMUST00000184012 127 ntBASIC18.86■□□□□ 0.61
Ube4aE9Q735 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.86■□□□□ 0.61
Ube4aE9Q735 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.86■□□□□ 0.61
Ube4aE9Q735 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.86■□□□□ 0.61
Ube4aE9Q735 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4aE9Q735 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.85■□□□□ 0.61
Ube4aE9Q735 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Gm8318-201ENSMUST00000182954 872 ntBASIC18.85■□□□□ 0.61
Ube4aE9Q735 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms