Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Gm43630-201ENSMUST00000201550 776 ntBASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Gm6218-201ENSMUST00000219812 628 ntBASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85cE9Q6B2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc85cE9Q6B2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 AC153962.4-201ENSMUST00000217878 242 ntBASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85cE9Q6B2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Gm13829-201ENSMUST00000119600 138 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Gm27838-201ENSMUST00000184829 128 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Gm2272-201ENSMUST00000194903 582 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Gm6180-201ENSMUST00000065243 498 ntBASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85cE9Q6B2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc85cE9Q6B2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms