Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC8.76□□□□□ -1.01
Herc1E9PZP8 Gm45930-201ENSMUST00000221330 292 ntBASIC8.76□□□□□ -1.01
Herc1E9PZP8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Herc1E9PZP8 Gm35558-201ENSMUST00000222675 2219 ntBASIC8.76□□□□□ -1.01
Herc1E9PZP8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Gm12997-201ENSMUST00000120207 640 ntBASIC8.75□□□□□ -1.01
Herc1E9PZP8 CT009718.3-201ENSMUST00000221116 367 ntBASIC8.75□□□□□ -1.01
Herc1E9PZP8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.75□□□□□ -1.01
Herc1E9PZP8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Herc1E9PZP8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Herc1E9PZP8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.74□□□□□ -1.01
Herc1E9PZP8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC8.74□□□□□ -1.01
Herc1E9PZP8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Dctn4-202ENSMUST00000223590 1530 ntBASIC8.74□□□□□ -1.01
Herc1E9PZP8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC8.74□□□□□ -1.01
Herc1E9PZP8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Gm9445-201ENSMUST00000207454 1285 ntBASIC8.74□□□□□ -1.01
Herc1E9PZP8 Gm18054-201ENSMUST00000207539 555 ntBASIC8.74□□□□□ -1.01
Herc1E9PZP8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Herc1E9PZP8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC8.73□□□□□ -1.01
Herc1E9PZP8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm11628-201ENSMUST00000117568 171 ntBASIC8.73□□□□□ -1.01
Herc1E9PZP8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm6013-201ENSMUST00000212264 699 ntBASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm19309-201ENSMUST00000218295 205 ntBASIC8.73□□□□□ -1.01
Herc1E9PZP8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Gm3961-201ENSMUST00000204425 994 ntBASIC8.73□□□□□ -1.01
Herc1E9PZP8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.73□□□□□ -1.01
Herc1E9PZP8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms