Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Gm12008-201ENSMUST00000117791 755 ntBASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Gm38225-201ENSMUST00000194001 393 ntBASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Gm18753-201ENSMUST00000201000 566 ntBASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.64■□□□□ 0.09
Col6a3E9PWQ3 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Gm15823-201ENSMUST00000064305 670 ntBASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Gm27892-201ENSMUST00000185017 106 ntBASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a3E9PWQ3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Gm18049-201ENSMUST00000208909 581 ntBASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a3E9PWQ3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms