Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a9E9PUP3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a9E9PUP3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a9E9PUP3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a9E9PUP3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slc4a9E9PUP3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Gm15653-201ENSMUST00000119247 907 ntBASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Gm8969-201ENSMUST00000199694 526 ntBASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a9E9PUP3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Gm14719-201ENSMUST00000121891 340 ntBASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a9E9PUP3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Slc4a9E9PUP3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Slc4a9E9PUP3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc4a9E9PUP3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Gm6973-201ENSMUST00000117080 721 ntBASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Gm6912-201ENSMUST00000117218 544 ntBASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Gm8410-201ENSMUST00000117225 605 ntBASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc4a9E9PUP3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms