Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Syce3B5KM66 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Syce3B5KM66 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Syce3B5KM66 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.11■□□□□ 0.49
Syce3B5KM66 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.11■□□□□ 0.49
Syce3B5KM66 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.11■□□□□ 0.49
Syce3B5KM66 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syce3B5KM66 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Syce3B5KM66 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Syce3B5KM66 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.1■□□□□ 0.49
Syce3B5KM66 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Syce3B5KM66 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.1■□□□□ 0.49
Syce3B5KM66 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.1■□□□□ 0.49
Syce3B5KM66 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syce3B5KM66 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.09■□□□□ 0.49
Syce3B5KM66 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Syce3B5KM66 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.09■□□□□ 0.49
Syce3B5KM66 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.09■□□□□ 0.49
Syce3B5KM66 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Syce3B5KM66 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.09■□□□□ 0.49
Syce3B5KM66 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.09■□□□□ 0.49
Syce3B5KM66 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.09■□□□□ 0.49
Syce3B5KM66 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syce3B5KM66 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.08■□□□□ 0.49
Syce3B5KM66 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Syce3B5KM66 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Syce3B5KM66 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Syce3B5KM66 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syce3B5KM66 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Syce3B5KM66 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.08■□□□□ 0.48
Syce3B5KM66 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Syce3B5KM66 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.08■□□□□ 0.48
Syce3B5KM66 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.07■□□□□ 0.48
Syce3B5KM66 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms