Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf3B2RUQ2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm23935-201ENSMUST00000102303 57 ntBASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm24270-201ENSMUST00000102326 57 ntBASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm15467-201ENSMUST00000120582 445 ntBASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm24245-201ENSMUST00000157318 57 ntBASIC13.16□□□□□ -0.3
Usf3B2RUQ2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm10576-201ENSMUST00000191927 825 ntBASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm29707-201ENSMUST00000196325 491 ntBASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf3B2RUQ2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf3B2RUQ2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms