Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc22a28B2RT89 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc22a28B2RT89 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc22a28B2RT89 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc22a28B2RT89 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc22a28B2RT89 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc22a28B2RT89 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Slc22a28B2RT89 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Gm6433-201ENSMUST00000118634 875 ntBASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Slc22a28B2RT89 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gm18032-201ENSMUST00000222541 538 ntBASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc22a28B2RT89 BC037039-201ENSMUST00000192003 2205 ntBASIC14.56□□□□□ -0.08
Slc22a28B2RT89 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc22a28B2RT89 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Mir770-201ENSMUST00000103252 94 ntBASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Gm9013-201ENSMUST00000132939 882 ntBASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc22a28B2RT89 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms