Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.19■□□□□ 0.82
Scn7aB1AYL1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn7aB1AYL1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Gm29541-201ENSMUST00000191351 678 ntBASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Scn7aB1AYL1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn7aB1AYL1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Gm13223-201ENSMUST00000118609 747 ntBASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Gm15693-201ENSMUST00000120470 637 ntBASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn7aB1AYL1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.15■□□□□ 0.82
Scn7aB1AYL1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gm18057-201ENSMUST00000208220 503 ntBASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn7aB1AYL1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms