Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Gm16198-201ENSMUST00000118766 670 ntBASIC11.84□□□□□ -0.51
Col6a5A6H584 Gm27533-201ENSMUST00000183800 152 ntBASIC11.84□□□□□ -0.51
Col6a5A6H584 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a5A6H584 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col6a5A6H584 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Col6a5A6H584 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Gm11543-201ENSMUST00000120758 370 ntBASIC11.84□□□□□ -0.51
Col6a5A6H584 Gm2272-201ENSMUST00000194903 582 ntBASIC11.84□□□□□ -0.51
Col6a5A6H584 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.84□□□□□ -0.51
Col6a5A6H584 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a5A6H584 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a5A6H584 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col6a5A6H584 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a5A6H584 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a5A6H584 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.83□□□□□ -0.52
Col6a5A6H584 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.83□□□□□ -0.52
Col6a5A6H584 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.83□□□□□ -0.52
Col6a5A6H584 Gm7775-201ENSMUST00000218871 853 ntBASIC11.83□□□□□ -0.52
Col6a5A6H584 Shd-206ENSMUST00000225145 998 ntBASIC11.83□□□□□ -0.52
Col6a5A6H584 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col6a5A6H584 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col6a5A6H584 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.83□□□□□ -0.52
Col6a5A6H584 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.83□□□□□ -0.52
Col6a5A6H584 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col6a5A6H584 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.83□□□□□ -0.52
Col6a5A6H584 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a5A6H584 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Col6a5A6H584 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Col6a5A6H584 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.82□□□□□ -0.52
Col6a5A6H584 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.82□□□□□ -0.52
Col6a5A6H584 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.82□□□□□ -0.52
Col6a5A6H584 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col6a5A6H584 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Col6a5A6H584 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Gm8062-201ENSMUST00000139696 444 ntBASIC11.82□□□□□ -0.52
Col6a5A6H584 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.82□□□□□ -0.52
Col6a5A6H584 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a5A6H584 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Dmtn-207ENSMUST00000228001 2437 ntBASIC11.81□□□□□ -0.52
Col6a5A6H584 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.81□□□□□ -0.52
Col6a5A6H584 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms