Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Gm9824-201ENSMUST00000178707 561 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 Gm37714-201ENSMUST00000194742 342 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.74□□□□□ -0.37
Chd6A3KFM7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd6A3KFM7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gm37466-201ENSMUST00000195692 652 ntBASIC12.73□□□□□ -0.37
Chd6A3KFM7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gm14042-201ENSMUST00000120139 833 ntBASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chd6A3KFM7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd6A3KFM7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.73□□□□□ -0.37
Chd6A3KFM7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd6A3KFM7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm4518-201ENSMUST00000182638 718 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.72□□□□□ -0.37
Chd6A3KFM7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd6A3KFM7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.71□□□□□ -0.37
Chd6A3KFM7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd6A3KFM7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.71□□□□□ -0.38
Chd6A3KFM7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.71□□□□□ -0.38
Chd6A3KFM7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms