Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mir6977-201ENSMUST00000184960 64 ntBASIC13.28□□□□□ -0.28
Col6a4A2AX52 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.27□□□□□ -0.28
Col6a4A2AX52 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Gm9385-201ENSMUST00000117563 472 ntBASIC13.27□□□□□ -0.28
Col6a4A2AX52 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.27□□□□□ -0.28
Col6a4A2AX52 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col6a4A2AX52 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.27□□□□□ -0.29
Col6a4A2AX52 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.27□□□□□ -0.29
Col6a4A2AX52 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a4A2AX52 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a4A2AX52 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Mir1895-201ENSMUST00000122615 79 ntBASIC13.25□□□□□ -0.29
Col6a4A2AX52 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.25□□□□□ -0.29
Col6a4A2AX52 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.25□□□□□ -0.29
Col6a4A2AX52 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.25□□□□□ -0.29
Col6a4A2AX52 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms