Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Gm33142-201ENSMUST00000193913 867 ntBASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Gm7367-201ENSMUST00000057611 492 ntBASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.11□□□□□ -0.47
Trbv17A0A140T8P8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv17A0A140T8P8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms