Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc194A0A140LIT1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc194A0A140LIT1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 App-207ENSMUST00000227737 2827 ntBASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Gm6623-201ENSMUST00000173570 544 ntBASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Gm9987-201ENSMUST00000069768 567 ntBASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc194A0A140LIT1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc194A0A140LIT1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 348.2 ms