Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9d-4A0A0G2JG37 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav9d-4A0A0G2JG37 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm15378-201ENSMUST00000121894 207 ntBASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm12085-201ENSMUST00000119263 940 ntBASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm7638-201ENSMUST00000121348 967 ntBASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Actl10-202ENSMUST00000226583 1501 ntBASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms