Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm5864-201ENSMUST00000202263 970 ntBASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Phf7-203ENSMUST00000226565 1971 ntBASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm11336-201ENSMUST00000118168 334 ntBASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms