Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm10566-201ENSMUST00000086739 996 ntBASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13d-4A0A0G2JFX3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13d-4A0A0G2JFX3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm2274-201ENSMUST00000184539 609 ntBASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm36967-201ENSMUST00000193814 266 ntBASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm7213-201ENSMUST00000215977 950 ntBASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms