Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms