Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-5A0A075B6B5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-5A0A075B6B5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Gm12134-201ENSMUST00000122109 520 ntBASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Gm44450-201ENSMUST00000199528 114 ntBASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms