Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Gm25406-201ENSMUST00000157599 105 ntBASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-4A0A075B6B4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Gm27867-201ENSMUST00000184778 125 ntBASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Gm9172-201ENSMUST00000212092 954 ntBASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-4A0A075B6B4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-4A0A075B6B4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-4A0A075B6B4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-4A0A075B6B4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-4A0A075B6B4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gm6257-201ENSMUST00000163864 910 ntBASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gm25745-201ENSMUST00000174945 133 ntBASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms