Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Gm7370-201ENSMUST00000219471 767 ntBASIC12.57□□□□□ -0.4
Trav17A0A075B655 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav17A0A075B655 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Gm20760-201ENSMUST00000179197 648 ntBASIC12.56□□□□□ -0.4
Trav17A0A075B655 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.56□□□□□ -0.4
Trav17A0A075B655 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav17A0A075B655 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Gm21814-202ENSMUST00000203277 873 ntBASIC12.55□□□□□ -0.4
Trav17A0A075B655 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms