Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Gm13234-201ENSMUST00000120010 747 ntBASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-4A0A075B654 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav3-4A0A075B654 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-4A0A075B654 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms