Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Timm23-208ENSMUST00000226683 750 ntBASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-2A0A075B649 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav13-2A0A075B649 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms