Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav4-2A0A075B638 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Gm11539-201ENSMUST00000119837 557 ntBASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Gm20049-201ENSMUST00000219950 730 ntBASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-2A0A075B638 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-2A0A075B638 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms