Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Gm10052-201ENSMUST00000168019 960 ntBASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Gm7729-201ENSMUST00000050143 801 ntBASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9-1A0A075B601 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Mir770-201ENSMUST00000103252 94 ntBASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Gm18032-201ENSMUST00000222541 538 ntBASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-1A0A075B601 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Gm9987-201ENSMUST00000069768 567 ntBASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms