Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Gm27742-201ENSMUST00000184667 60 ntBASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav1A0A075B5Z4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav1A0A075B5Z4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav1A0A075B5Z4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 BC037039-201ENSMUST00000192003 2205 ntBASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Gm44454-201ENSMUST00000198541 138 ntBASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav1A0A075B5Z4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Mir7071-201ENSMUST00000184847 69 ntBASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms