Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Grk6-207ENSMUST00000225925 2769 ntBASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm5538W4VSP6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm5538W4VSP6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm5538W4VSP6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Gm12644-201ENSMUST00000119935 606 ntBASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Gm34391-201ENSMUST00000203706 907 ntBASIC16.1■□□□□ 0.17
Gm5538W4VSP6 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm5538W4VSP6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm4459-201ENSMUST00000118750 468 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.09■□□□□ 0.17
Gm5538W4VSP6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms