Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Asic1-205ENSMUST00000228185 1818 ntBASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb1S4R1E0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Gm7889-201ENSMUST00000185591 958 ntBASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1S4R1E0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms