Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac6Q9Z2V5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac6Q9Z2V5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Hdac6Q9Z2V5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac6Q9Z2V5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac6Q9Z2V5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Mir449b-201ENSMUST00000104833 80 ntBASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac6Q9Z2V5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.72■□□□□ 0.75
Hdac6Q9Z2V5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Gm22175-201ENSMUST00000175007 78 ntBASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac6Q9Z2V5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac6Q9Z2V5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac6Q9Z2V5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac6Q9Z2V5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac6Q9Z2V5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms