Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Gm25911-201ENSMUST00000157621 56 ntBASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Gm4899-201ENSMUST00000178708 719 ntBASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn8aQ9WTU3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Scn8aQ9WTU3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Scn8aQ9WTU3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn8aQ9WTU3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn8aQ9WTU3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn8aQ9WTU3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Gm14494-201ENSMUST00000118786 435 ntBASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn8aQ9WTU3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn8aQ9WTU3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms