Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Gm27704-201ENSMUST00000185094 107 ntBASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn2Q9R0A1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clcn2Q9R0A1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clcn2Q9R0A1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clcn2Q9R0A1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms