Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prg4Q9JM99 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.36□□□□□ -0.11
Prg4Q9JM99 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prg4Q9JM99 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.35□□□□□ -0.11
Prg4Q9JM99 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Gm18489-201ENSMUST00000172565 551 ntBASIC14.35□□□□□ -0.11
Prg4Q9JM99 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.35□□□□□ -0.11
Prg4Q9JM99 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prg4Q9JM99 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Gm13036-201ENSMUST00000117799 748 ntBASIC14.34□□□□□ -0.11
Prg4Q9JM99 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.34□□□□□ -0.11
Prg4Q9JM99 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Gm5682-201ENSMUST00000173402 505 ntBASIC14.34□□□□□ -0.11
Prg4Q9JM99 Gm6443-201ENSMUST00000203599 874 ntBASIC14.34□□□□□ -0.11
Prg4Q9JM99 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.34□□□□□ -0.11
Prg4Q9JM99 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prg4Q9JM99 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prg4Q9JM99 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prg4Q9JM99 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prg4Q9JM99 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prg4Q9JM99 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prg4Q9JM99 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gm1401-201ENSMUST00000122048 772 ntBASIC14.33□□□□□ -0.12
Prg4Q9JM99 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.33□□□□□ -0.12
Prg4Q9JM99 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.33□□□□□ -0.12
Prg4Q9JM99 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.33□□□□□ -0.12
Prg4Q9JM99 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prg4Q9JM99 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.33□□□□□ -0.12
Prg4Q9JM99 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms