Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Nup50Q9JIH2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup50Q9JIH2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Gm25406-201ENSMUST00000157599 105 ntBASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup50Q9JIH2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 BC037039-201ENSMUST00000192003 2205 ntBASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup50Q9JIH2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup50Q9JIH2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms