Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx2-4Q9EQM3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-4Q9EQM3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Gm5779-201ENSMUST00000218467 910 ntBASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-4Q9EQM3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Gm14127-201ENSMUST00000117906 678 ntBASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-4Q9EQM3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms